Lobo AK, Traeger LL, Keller MP, Attie AD, Rey FE, Broman KW (2021) Identification of sample mix-ups and mixtures in microbiome data in Diversity Outbred mice. G3 (Bethesda), to appear
Figure 3. — Plot of maximum achieved likelihood ratio test statistic (for the test of no mixture) vs. the estimated proportion from a contaminant, for each microbiome sample. The samples are categorized by our conclusions about their status.