| 3 Sep |
|
Course introduction  (and see resources) |
| 8 Sep |
|
Tables → graphs: Gelman et al. (2002) |
| 10 Sep |
|
Open access publishing: Van Noorden (2013) , Piwowar et al (2018) |
| 15 Sep |
|
Snow on Cholera (through pg 68, “New water supply of the Lambeth Company”) |
| 17 Sep |
|
Complete Snow on Cholera |
| 22 Sep |
|
Lipids and heart disease: Lipid Research Clinics Program (1984), part 2 |
| 24 Sep |
|
No class meeting |
| 29 Sep |
|
Skin cancer: Wang et al. (2019) |
| 1 Oct |
|
No class meeting |
| 6 Oct |
|
Hormone replacement therapy: Hernán et al. (2008) |
| 8 Oct |
|
Hormone replacement therapy discussion and response: |
| |
|
Hoover (2008); Stampfer (2008); Prentice (2008); Hernán and Robins (2008); Willett et al. (2008) |
| 13 Oct |
|
Mammography: Berry (1998), Kopans and Halpern (1999) |
| 15 Oct |
|
No class meeting |
| 20 Oct |
|
Propensity scores: Rosenbaum and Rubin (1983) |
| 22 Oct |
|
No class meeting |
| 27 Oct |
|
Causal inference: Pearl (2009) |
| 29 Oct |
|
No class meeting |
| 3 Nov |
|
OHDSI: Ryan et al. (2013) |
| 5 Nov |
|
OHDSI: Madigan et al. (2013) |
| 10 Nov |
|
Data vis: Lex et al. (2014) |
| 12 Nov |
|
Data vis: Chelaru et al. (2014) |
| 17 Nov |
|
Deep learning: LeCun et al. (2015), Angermueller et al. (2016) |
| 19 Nov |
|
No class meeting |
| 24 Nov |
|
Deep learning and Manubot: Ching et al. (2018), Himmelstein et al. (2019) |
| 26 Nov |
|
No class meeting |
| 1 Dec |
|
Statistical modeling: the two cultures Breiman (2001) |
| 3 Dec |
|
No class meeting |
| 8 Dec |
|
tSNE: van der Maaten & Hinton (2008) [supplement] |
| 10 Dec |
|
No class meeting |